Yacht Cruising Baja California Sur: Best Marinas and Berthing Tips

If you’re planning to cruise along the Baja California Sur coastline, you’re about to discover one of the most unique yachting destinations in the world, where the Sea of Cortez meets pristine desert landscapes and world-class marine life.
Baja California Sur: The Hidden Gem of Superyacht Cruising
Stretching between the Pacific Ocean and the Sea of Cortez, Baja California Sur offers breathtaking anchorages, secluded coves, and a growing network of marinas capable of accommodating superyachts. From Cabo San Lucas to Loreto, every stop has its own charm… whether it’s a luxurious resort vibe or a quiet, off-grid paradise.
But before setting course, it’s essential to plan ahead. Marina space can be limited, and seasonal demand (especially between November and April) is high. Advance reservations are strongly recommended to ensure a smooth arrival.
Understanding Marina Rates and Availability
Marina fees across Baja vary depending on yacht size, facilities, and location. And lets consider its remote location and that most supplies must be transported from mainland Mexico or from abroad, Baja’s operational costs are often higher, putting it on par with upscale international destinations.
Despite the costs, captains agree it’s worth every peso. The scenery, diving spots, and the sense of exclusivity make Baja a bucket-list destination for any superyacht itinerary.
Pro Tip: Always confirm customs clearance and fueling schedules ahead of time… most marinas coordinate with Eco Naviera to streamline formalities and reduce downtime.
Pro Tip: Always confirm customs clearance and fueling schedules ahead of time — most marinas coordinate with Eco Naviera to streamline formalities and reduce downtime.
Top Marinas for Yachts Over 90 Feet
Below is an overview of key marinas along the Sea of Cortez that can safely accommodate large vessels:
Loreto / Puerto Escondido
• Puerto Escondido Marina
La Paz
- Marina de La Paz
- Marina Cortez
- Marina Costa Baja
- Tourist Dock (controlled by Customs and the Navy)
Pichilingue
- Commercial Dock 2 (controlled by Customs and the Navy)
East Cape
- Costa Palmas Marina
San José del Cabo
- Puerto Los Cabos Marina
Cabo San Lucas
- IGY Cabo Marina
Each of these destinations offers different amenities from full-service shipyards to boutique-style marinas surrounded by luxury resorts.

Why Advance Planning Matters
Because of limited infrastructure and growing demand, we always encourage captains and yacht managers to plan well in advance. Booking marina space early not only secures availability but also ensures access to preferred berths and local services such as provisioning, immigration handling, and logistics support.
Eco Naviera’s team has assisted dozens of superyachts navigating the Sea of Cortez in recent years, from logistical coordination to on-the-ground support in La Paz, Loreto, and Cabo.

Let’s Get You Docked
If you’re planning a stop in Baja California Sur, we’re here to help you arrange marina bookings and provide full support throughout your stay. Whether you’re managing a superyacht charter or a private expedition, our local knowledge and relationships with marinas across the peninsula ensure a seamless experience.
Get in touch with Eco Naviera Yacht Services to start planning your next cruise through the Sea of Cortez.
Comparison of Marinas in Baja California Sur
If you are planning on cruising the Sea of Cortez, below is a quick overview of the main marinas in Baja California Sur, including their capacities, facilities, and services available at the dock for superyachts and private vessels. However, marina management is dynamic and affects accessibility, prices, and restrictions.
| No. | Location: | Marina: | Fits a superyacht? | Longest LOA (ft) been there OR longest dock | Electricity on the longest dock? | Water on the longest dock? | Garbage disposal: | If I’m at anchor can I do tender runs? |
| 1 | Puerto Econdido, Loreto | Marina Puerto Escondido | Yes | 290′ | Yes | Yes | Yes | Yes |
| 2 | La Paz | Pichilingue | Yes | 414′ | No | Only via truck | Yes, with prior customs authorization | Yes, with 24hr in advance request |
| 3 | La Paz | Muelle Turistico | Yes | 214.89′ | No | Only via truck | Yes, with prior customs authorization | Yes, request must be submitted 24hr in advance. |
| 4 | La Paz | Marina de La Paz | Yes | 200′ | Yes | Yes | Yes | To verify availability first. |
| 5 | La Paz | Marina Costa Baja | Yes | 234′ | Yes | Yes | Yes | Subjetc to signing contract first. |
| 6 | La Paz | Marina Cortez | Yes | 234′ | No | Yes | Yes | Yes |
| 7 | East Cape | Costa Palmas Marina | Yes | 240′ | Yes | Yes | Yes | Yes |
| 8 | San Jose del Cabo | Marina Puerto los Cabos | Yes | 230′ | Yes / depends on the dock | Only via truck | Yes | To verify availability first. |
| 9 | Cabo San Lucas | IGY Marina | Yes | 330′ | Yes | Yes | Yes | To verify availability first. |
Please use this table as a reference, and contact one of our authorized agents for more details.
Eco Naviera
Authorized Yacht Agent in Mexico since 2008







